Endosymbiotic Origin & Host-Microbe Interactions

Shih-Hsun Walter Hung's Profile

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Publications

• Hung SHW, Yu MY, Liu CH, Huang TC, Peng JH, Jang NY, Kuo CH, Ho YN, Chiang EPI, Hwang HH, Huang CC* (2024) Endophytic pyrroloquinoline quinone enhances banana growth and immunity against Fusarium wilt for plant-microbe mutualisms. [bioRxiv DOI: 10.1101/2024.08.20.608638] [Science Cast]

• Hung SHW, Yeh PH, Huang TC, Huang SY, Wu IC, Liu CH, Lin YH, Chien PR, Huang FC, Ho YN, Kuo CH, Hwang HH, Chiang EPI, Huang CC* (2024) A cyclic dipeptide for salinity stress alleviation and the trophic flexibility of endophyte provide insights into saltmarsh plant-microbe interactions. ISME Communications 4(1):ycae041. DOI: 10.1093/ismeco/ycae041 [bioRxiv DOI: 10.1101/2023.12.12.56998] [Science Cast]

• Nguyen TTM, Ha-Tran, DM, Tran BV, Hung SHW, Huang CC* (2023) Plant-derived antimicrobial peptides: a plant defense weapon against biotic and abiotic stresses. [Preprints DOI: 10.20944/preprints202311.1458.v1]

• Hung SHW, Wu IC, Huang CC*, Kuo CH* (2023) Complete genome sequence of Erythrobacteraceae bacterium WH01K, a strain isolated from corals (Acropora sp.) in Taiwan. Microbiology Resource Announcements 12:e00830-23. DOI: 10.1128/mra.00830-23

• Lo SC, Tsai SY, Chang WH, Wu IC, Sou NL, Hung SHW, Chiang EPI, Huang CC* (2023) Characterization of the pyrroloquinoline quinone producing Rhodopseudomonas palustris as a plant growth-promoting bacterium under photoautotrophic and photoheterotrophic culture conditions. International Journal of Molecular Sciences 24(18):14080. DOI: 10.3390/ijms241814080

• Hung SHW, Huang TC, Lai YC, Wu IC, Liu CH, Huarng YF, Hwang HH, Chiang EPI, Kuo CH, Huang CC* (2023) Endophytic biostimulants for smart agriculture: Burkholderia seminalis 869T2 benefits heading leafy vegetables in-field management in Taiwan. Agronomy 13(4):967. DOI: 10.3390/agronomy13040967

• Hung SHW, Chiu MC, Huang CC*, Kuo CH* (2022) Complete genome sequence of Curtobacterium sp. C1, a beneficial endophyte with the potential for in-plant salinity stress alleviation. Molecular Plant-Microbe Interactions 35(8):731-735. DOI: 10.1094/MPMI-01-22-0027-A

• Hwang HH*, Chien PR, Huang FC, Yeh, PH, Hung SHW, Deng WL, Huang CC* (2022) A plant endophytic bacterium Priestia megaterium strain BP-R2 isolated from the halophyte Bolboschoenus planiculmis enhances plant growth under salt and drought stresses. Microorganisms 10(10):2047. DOI: 10.3390/microorganisms10102047

• Hwang HH*, Huang FC, Chien PR, Hung SH, Kuo CH, Deng WL, Chiang EPI, Huang CC* (2021) A plant endophytic bacterium, Burkholderia seminalis strain 869T2, promotes plant growth in Arabidopsis, pak choi, Chinese amaranth, lettuces, and other vegetables. Microorganisms 9(8):1703. DOI: 10.3390/microorganisms9081703

• Ha-Tran DM, Nguyen TTM, Hung SH, Huang E, Huang CC* (2021) Roles of plant growth-promoting rhizobacteria (PGPR) in stimulating salinity stress defense in plants: a review. International Journal of Molecular Sciences 22:3154. DOI: 10.3390/ijms22063154

• Nguyen BT, Hsieh JL, Lo SC, Wang SY, Hung CH, Huang E, Hung SH, Chin WC, Huang CC* (2021) Biodegradation of dioxins by Burkholderia cenocepacia strain 869T2: Role of 2-haloacid dehalogenase. Journal of Hazardous Materials 5(401):123347. DOI: 10.1016/j.jhazmat.2020.123347

Genome Resources

• Hung SHW, Wu IC, Liu CH, Huang CC, Kuo CH (2023) Complete genome sequence of Erythrobacteraceae bacterium WH01K. NCBI  BioProject: PRJNA922479; GenBank assembly accession: GCA_027941995.1; chromosome: CP115966.1; plasmid: CP115967.1.

• Hung SHW, Yeh PH, Kuo CH, Huang CC (2022) Complete genome sequence of Priestia megaterium BP01R2. NCBI  BioProject: PRJNA806882; GenBank assembly accession: GCA_022537925.1; chromosome: CP092387.1; plasmid: CP092388.1, CP092389.1, CP092390.1, CP092391.1, CP092392.1, CP092393.1.

• Hung SH, Chiu MC, Huang CC, Kuo CH (2021) Complete genome sequence of Curtobacterium sp. C1. NCBI  BioProject: PRJNA783154; GenBank assembly accession: GCA_021049325.1; chromosome: CP088076.1; plasmid: CP088077.1, CP088078.1, CP088079.1.

• Hung SH, Huang CT, Huang CC, Kuo CH (2021) Complete genome sequence of Burkholderia seminalis 869T2. NCBI  BioProject: PRJNA243842; GenBank assembly accession: GCA_000705535.2; chromosome 1-3: CP072520.1, CP072521.1, CP072522.1.

Conferences and Other Academic Activities †oral *poster ††host †††instructor

2024

• Hung SHW † (2024) My Research on Molecular Host-Microbe Symbiosis. Academic Visiting. Dr Mei-Fang Chien Lab, Graduate School of Environmental Studies Department of Environmental Studies for Advanced Society Resources Strategies Geoenvironmental Remediation, Tohoku University, Sendai, Japan.

2023

• Hung SHW,*  Kuo CH, Huang CC (2023) Insights into Molecular Plant-Endophyte Interactions: Novel Biostimulants Attune Photosynthesis and Respiration in Plants. The 15th International Colloquium on Endocytobiology and Symbiosis. International Society of Endocytobiology (ISE). Field Museum, Chicago, IL USA.

• Hwang HH, Chien PR, Huang FC, Wu CL, Chen LY, Hung SHW, Huang CC (2023) A plant endophytic bacterium, Burkholderia sp. strain 869T2, promotes plant growth of Arabidopsis, lettuces, and several other vegetables. The 33rd International Conference on Arabidopsis Research (ICAR2023): PO-164. International Conference Hall, Makuhari Messe, Chiba, Japan.

• Hung SHW,* Ho YN, Chiang ENI, Kuo CH, Huang CC (2023) Endophytic Biostimulants for Future Agriculture and Beyond. Global Young Scientists Summit (GYSS). Singapore University of Technology and Design (SUTD), Singapore.

• Liu CH,*,† Shen YH, Hung SH,* Huang CC (2023) Synthetic Biology for Sustainable Agriculture: Endophytic Biostimulants as A Novel Solution to Net Zero. MiTalk 7 Young Scientist Workshop. National Taiwan Ocean University, Keelung, Taiwan.

2022

• Hung SHW † (2022) My Research on Molecular Plant-Endophyte Interactions. Academic Visiting. Dr Saskia Hogenhout Lab, The John Innes Centre, Norwich Research Park, Norwich, UK.

• Hung SHW,† Huang CC, Kuo CH (2022) Beyond GMOs: Endophytic Biostimulants for Future Agriculture. Travel Grant Competition for Young Scholars. Institute of Plant and Microbial Biology, Academia Sinica, Taipei, Taiwan.

• Su I, Hsu MY, Hung CC, Tsui JY, Yang YY, Sung CH, Zhang WH, Chang WT, Chen LT, Chang YC, Liu TM, Chi HY, Lee SH, Cheng FY, Shen YH, Liu CH, Hung SH,*,††† Huang E, Huang CC (2022) Incredible Natto for Wound Repair to Diabetic Patients. Taiwan iGEM Meet '22 Conference. Taiwan Synbio Alliance. National Cheng Kung University, Tainan, Taiwan.

2021

• Hung SH,† Huang CC, Kuo CH (2021) Endophytic Biostimulant for Agriculture: A Multi-Omics Perspective on Burkholderia seminalis 869T2 and Its Metabolites. Joint Conference for Agriculture Biotechnology: p.33. International Society of Biocatalysis and Agricultural Biotechnology (ISBAB) Taiwan Chapter. NCHU Huisun Experimental Forest Station, Taichung, Taiwan.

• Hung SH,††† Lu YC, Huang E, Chung YH, Shen YH, Chen YL, Liu CH, Zhang JK, Weng TT, Chiang BT, Gong RT, Yang ZY, Wang CA, Lin TY, Zhang WH, Chung HL, Chiang SH, Wu YY, Huang CC (2021) Artificial Endophyte for Future Agriculture. International Genetically Engineered Machine (iGEM) 2021: 383029. The iGEM Foundation. Online. [URL]

• Fang T, Hung SH,* Huang CC (2021) Identification of Novel Biostimulant: PQQ. UCSD-NCHU/ENABLE/IDCSA /IARC Joint Symposium. NCHU, Taichung, Taiwan.

• Hung SH† (2021) A Ubiquitin-Independent Protein Degradation Model Reveals How Phytoplasma Turn Their Hosts into Zombies. Student Seminar. NCHU Dept Life Science, Taichung, Taiwan.

• Hung SH† (2021) What's After We Earned ATCG? A de novo Hybrid Genome Assembly Approach for Host-Associated Bacteria. Student Seminar. NCHU Dept Horticulture, Taichung, Taiwan.

• Hung SH† (2021) Development and Application of Biostimulants: Using Bacterial Endophyte to Promote Plants' Growth and Alleviate Abiotic Stress. Student Seminar. NCHU Dept Horticulture, Taichung, Taiwan.

2020

• Hung SH,† Kuo CH (2020) Comparative Genomics in Spiroplasma: The Evolution of Broad Thermal Adaptation. IPMB Summer Undergraduate Internship Programme. Academia Sinica IPMB, Taipei, Taiwan.

• Hung SH,* Pan IC (2020) Role of Lier Gene within the Regulation between Iron Deficiency and High Light Stress in Arabidopsis. Horticultural Research Poster Exhibition. NCHU Dept Horticulture, Taichung, Taiwan.

• Hung SH,*,†† Lu YC, Huang E, Chung YH, Shen YH, Chen YL, Liu CH, Zhang JK, Weng TT, Chiang BT, Gong RT, Yang ZY, Wang CA, Lin TY, Zhang WH, Chung HL, Chiang SH, Wu YY, Huang CC (2020) Artificial Endophyte for Future Agriculture. 2020 Taiwan iGEM Meetup Conference. 2021 iGEM Team NCHU_Taichung. NCHU, Taichung, Taiwan. [URL]

2019

• Hung SH,* Ho YN, Hwang HH, Huang CC (2019) Characterisations of An Endophytic Bacterium with Abilities to Stimulate Plant Growth and to Protect against Plant Disease. 2019 Annual Meeting and Symposium, New Version in Plant Science: Sustainable Development: PP4-27. Taiwan Society of Plant Biologists (TSPB). Academia Sinica, Taipei, Taiwan. [URL]

• Hung SH,†,* Huang E, Lin YC, Chung CT, Lin CP, Sung PW, Lai, YY, Lu YM, Yang Y, Chen ZY, Chen L, Chiang I, Huang CC (2019) Making Cloud out of Microbe: Strategy for Climate Regulation through Microbial Dimethyl Sulfide. International Genetically Engineered Machine (iGEM) 2019: 302992. The iGEM Foundation. Hynes Convention Center, Boston, MA USA. [URL]

• Hung SH,†,*,†† Huang E, Lin YC, Chung CT, Chiang I, Huang CC (2019) ColicloudN: CCN Produced with Microbes. 2019 Taiwan iGEM Conference. 2019 iGEM Team NCHU_Taichung. NCHU, Taichung, Taiwan. [URL]

• Hung SH,* Chen HJ, Huang E, Lin YH, Chang EN, Lai YL, Liang RH, Hsu TY, Sun TW, Huang CC (2019) Engineered Endophyte-Assisted Phytoremediation. Japan-Taiwan Plant Biology 2019 (JTPB2019) PT-133. Japanese Society of Plant Physiologists (JSPP) & Taiwan Society of Plant Biologists (TSPB). Nagoya University Higashiyama Campus, Nagoya, Japan. [PDF]

2018

• Hung SH,†,* Chen YC, Lin YH, Huang E, Lai YL, Yen YN, Chen HC, Lin YC, Sun TW, Liao TK, Wang YC, Hsu TY, Chang EN, Chen YH, Yu TW, Wang HM, Huang CC (2018) Engineered Endophyte-Assisted Phytoremediation. International Genetically Engineered Machine (iGEM) 2018: 254621. The iGEM Foundation. Hynes Convention Center, Boston, MA USA. [URL]

• Hung SH,†,*,†† Chen YC, Lin YH, Huang E, Lai YL, Yen YN, Chen HC, Lin YC, Sun TW, Liao TK, Wang YC, Hsu TY, Chang EN, Chen YH, Yu TW, Wang HM, Huang CC (2018) Engineered Endophyte-Assisted Phytoremediation. 2018 6th iGEM Asia-Pacific Conference. 2018 iGEM Team NCHU_Taichung. NCHU, Taichung, Taiwan. [URL]

• Hung SH,†,* Sun TW, Huang CC (2018) Engineered Endophyte-Assisted Phytoremediation. The 5th Conference of China iGEMer Community (CCiC). 2018 iGEM Team ShanghaiTech. SHTU, Shanghai, China. [URL]

• Hung SH,†,* Huang CC (2018) Dioxin Degradation with Phytoremediation. The 5th International Genetically Engineered Machine (iGEM) Central China Regional Conference. 2018 iGEM Team HUST-China. HUST, Wuhan, China. [URL]